Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTCAACCAGTGGCTGTT
..(((((((((((((...(((&)))...))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288656
GeneSymbolUBN1
Binding site4624,4645
Score0.923
Seed1
Au0.471
Energy-21.0
Binding len21
Me-5.19
Phylopstem-0.03960622857142855
Phylopflank0.009997996250000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure