Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTAAGTAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364998
GeneSymbolTAF6
Binding site566,592
Score0.846
Seed0
Au0.412
Energy-20.1
Binding len26
Me-5.728
Phylopstem-0.36484582777777774
Phylopflank-0.22828267249999998
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position5UTR
2D Structure