Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTCTGAGCTGCT
..((((((.(((..((((((.&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288667
GeneSymbolHCFC1R1
Binding site624,641
Score0.923
Seed1
Au0.353
Energy-21.3
Binding len17
Me-8.159
Phylopstem-0.14075504999999996
Phylopflank0.5985869842499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure