Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGGCCGAGAGCTGCT
..((((((.((((((((.(((&))).))))).)))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288703
GeneSymbolGGT6
Binding site390,412
Score0.846
Seed1
Au0.338
Energy-23.0
Binding len22
Me-6.013
Phylopstem-0.22654811111111103
Phylopflank-0.148171160125
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure