Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACACAGGGACCACAGTCTGCAAA
(((((((((.(((((((((((&)))))))).....))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288706
GeneSymbolIL1R1
Binding site1686,1714
Score0.923
Seed1
Au0.485
Energy-22.4
Binding len28
Me-5.18
Phylopstem1.20566054375
Phylopflank2.60260001375
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure