Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGAATGGCAGCTGGAAT
((.(((((((.(((.((....&)).))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288706
GeneSymbolIL1R1
Binding site4384,4402
Score0.923
Seed0
Au0.618
Energy-19.5
Binding len18
Me-9.055
Phylopstem-0.5666854571428571
Phylopflank-0.2529221650000001
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure