Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAAAGTGCTGTGGCCGCAGCTGTGT
..((((((((((((....(((&.)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288719
GeneSymbolSTAT5A
Binding site1520,1545
Score0.923
Seed1
Au0.441
Energy-23.3
Binding len19
Me-5.925
Phylopstem5.466079166666668
Phylopflank5.63652301875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure