Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAAAGTGCTGTGGCCGCAGCTGTGT
..((((((((((((....(((&.)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288720
GeneSymbolSTAT5A
Binding site1517,1542
Score1.0
Seed1
Au0.441
Energy-23.3
Binding len19
Me-5.925
Phylopstem3.997795333333334
Phylopflank4.70362676875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure