Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCCGGGAGCTGTT
..((((((.(((((((.((((&)))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288723
GeneSymbolB3GAT3
Binding site630,650
Score1.0
Seed1
Au0.426
Energy-23.9
Binding len20
Me-6.013
Phylopstem0.06123285714285714
Phylopflank-0.22959266125
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure