Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTGCCCCGGCTGCAT
.((((((((.(((....((((&))))...))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288723
GeneSymbolB3GAT3
Binding site340,360
Score0.846
Seed1
Au0.338
Energy-23.0
Binding len20
Me-6.861
Phylopstem0.23476176249999997
Phylopflank0.45156298500000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure