Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCTGCAGCTGGGC
.(.(((((((((((...((((&))))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288723
GeneSymbolB3GAT3
Binding site1341,1359
Score0.923
Seed0
Au0.309
Energy-22.4
Binding len18
Me-6.319
Phylopstem3.403044636363637
Phylopflank2.026292385
Longest consecutive pairings15
Position of longest consecutive pairings3
Pairings in 3prime end5
Position3UTR
2D Structure