Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGCACCTGACCCACAGCCGCAGCAGCAGC
((((.(((((((((((..(((&.))).))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288732
GeneSymbolTEX2
Binding site2330,2362
Score0.872
Seed0
Au0.382
Energy-27.6
Binding len22
Me-8.057
Phylopstem4.397567454545455
Phylopflank5.0294712988749986
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure