Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGAGCCCCAGCTGA
...((((((.((((..((((.&))))...)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288736
GeneSymbolATE1
Binding site3976,3995
Score0.865
Seed0
Au0.588
Energy-18.8
Binding len19
Me-8.726
Phylopstem5.418653333333332
Phylopflank3.9503167249999995
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure