Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAGCTGTGACCTCCCGGGACGGAGCTGCC
..((((((((((((((((((.&))))))))))))...............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288746
GeneSymbolCMTM5
Binding site733,767
Score0.923
Seed1
Au0.456
Energy-22.3
Binding len34
Me-4.957
Phylopstem1.3836765878787882
Phylopflank1.6260910650000007
Longest consecutive pairings12
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure