Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGACCCAGTAACTGTCCGCAGCTGTC
..(((((((((((((.(((((&)))))))).............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288747
GeneSymbolDKC1
Binding site2395,2427
Score0.923
Seed1
Au0.485
Energy-22.9
Binding len32
Me-5.19
Phylopstem-0.04324165384615387
Phylopflank0.6147249987500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure