Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGAGGACCTTGAGGGAGCAGCAAGGGCCCTGATGCGGCTGCAGG
(((((((((((((((((((((&.)))))......)))))...........))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288748
GeneSymbolP4HA3
Binding site413,462
Score0.846
Seed1
Au0.412
Energy-23.4
Binding len40
Me-3.938
Phylopstem-0.06082023421052637
Phylopflank0.05060377374999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure