Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTACACTGGAAAACAAGAAGGTTGGAGTTGGTCTA
(((((((.(((((((((((((&))))))................))))))).))..))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001288752
GeneSymbolTMPRSS5
Binding site1847,1887
Score0.846
Seed1
Au0.574
Energy-26.6
Binding len40
Me-6.251
Phylopstem0.6901020855172414
Phylopflank0.5597284855
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure