Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATGCGACGTGGCTGTG
..((((((((.((((((.((.&)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288752
GeneSymbolTMPRSS5
Binding site214,232
Score0.974
Seed1
Au0.309
Energy-20.3
Binding len18
Me-7.782
Phylopstem0.251560125
Phylopflank0.0050079925000000025
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure