Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTTAATCGTAGCTGCAAA
(((((((((((((((((((((&)))))))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288754
GeneSymbolRHOT1
Binding site1750,1774
Score0.808
Seed1
Au0.603
Energy-30.2
Binding len24
Me-3.938
Phylopstem5.697891304347825
Phylopflank5.15175453375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure