Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTTAATCGTAGCTGCAAA
(((((((((((((((((((((&)))))))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288755
GeneSymbolRHOT1
Binding site1746,1770
Score1.0
Seed1
Au0.603
Energy-30.2
Binding len24
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure