Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCCTGGGGAGGGTGAGTAATCCTGCATTGCTAAAAGAGAGGGTCTG
(((((((((((((((((((..&.))))))))..........))))).............)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001288769
GeneSymbolPDE1B
Binding site2538,2587
Score0.923
Seed1
Au0.441
Energy-25.6
Binding len44
Me-3.938
Phylopstem0.2508974266666666
Phylopflank0.24400064512499997
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end6
Position3UTR
2D Structure