Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCCCAGCTGCAGG
(((((((((.((((.......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288769
GeneSymbolPDE1B
Binding site2613,2627
Score1.0
Seed1
Au0.382
Energy-20.1
Binding len14
Me-6.149
Phylopstem-0.38915666666666665
Phylopflank-0.061405129875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure