Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCAGGAAGACTCTTCGCAGCTGCAT
.(((((((((((((((..(((&))).)))).........))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288770
GeneSymbolC17orf80
Binding site1520,1549
Score0.846
Seed1
Au0.412
Energy-21.7
Binding len29
Me-3.793
Phylopstem-0.32567732499999996
Phylopflank1.1422971850000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure