Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGAGCCCCTTCACCAATCATGCTGCAGCTGCTGGCAGGAAGACTCTTCGCAGCTGCAT
..(((((((((((((...(((&.)))...)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288771
GeneSymbolC17orf80
Binding site1487,1549
Score0.923
Seed1
Au0.412
Energy-24.5
Binding len22
Me-5.19
Phylopstem-0.2765220142857143
Phylopflank-0.0813367875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure