Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGGACTGCAGCGCAGG
((((.(((((((((.(.....&).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288773
GeneSymbolCEACAM21
Binding site317,333
Score0.865
Seed0
Au0.294
Energy-19.8
Binding len16
Me-8.792
Phylopstem-0.047894555555555565
Phylopflank0.46696356787499993
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure