Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCTAATCGCAGCATATGTAAT
(((((((((((((((...(((&)))...))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288773
GeneSymbolCEACAM21
Binding site572,597
Score0.923
Seed1
Au0.471
Energy-19.3
Binding len25
Me-4.171
Phylopstem0.03914756111111108
Phylopflank0.282432563125
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure