Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCCCGCAGCTGCC
..((((((((((((((.....&))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288776
GeneSymbolE4F1
Binding site1244,1261
Score0.846
Seed1
Au0.294
Energy-23.7
Binding len17
Me-4.957
Phylopstem2.9932774999999996
Phylopflank1.23658611625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure