Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGTGGCTT
....(((((((((((((....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288776
GeneSymbolE4F1
Binding site1676,1690
Score0.846
Seed0
Au0.338
Energy-20.5
Binding len14
Me-9.547
Phylopstem4.180554384615384
Phylopflank4.050939537500001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure