Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGCACCAGTTCTGCAGCCGTGGCTT
....(((((((((((((((((&)))).............))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288778
GeneSymbolE4F1
Binding site1128,1159
Score0.846
Seed0
Au0.353
Energy-21.1
Binding len31
Me-9.547
Phylopstem2.03522741
Phylopflank1.7020612450000006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure