Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGTCTTGGCTCTGGGGTGTGCTGGGA
.((((((((((....((((...&.))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001288798
GeneSymbolMCRIP1
Binding site931,962
Score0.923
Seed1
Au0.382
Energy-18.0
Binding len18
Me-10.022
Phylopstem-0.057913319999999976
Phylopflank0.05368085250000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure