Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAGCCCCAGTGCCTGCT
..(((((((.((((((.((((&)))))))))).)))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288802
GeneSymbolNFATC4
Binding site2046,2068
Score0.846
Seed1
Au0.353
Energy-20.8
Binding len22
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure