Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGGCCCACTGCTGGCTGCAGC
(((((((((((((((((((((&)))))))))))).)........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288803
GeneSymbolFPGS
Binding site913,944
Score0.846
Seed1
Au0.279
Energy-26.6
Binding len31
Me-3.938
Phylopstem3.7794553733333336
Phylopflank2.0176394099999992
Longest consecutive pairings12
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure