Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCATAGAGAGAGAGGCCAGGCTGCACCGACAAGCTGCAGCTGTGAA
((((((((((((((....(((&.)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288819
GeneSymbolCPEB1
Binding site1026,1078
Score1.0
Seed1
Au0.382
Energy-25.8
Binding len23
Me-4.906
Phylopstem4.404817214285714
Phylopflank2.3870898725
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure