Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTGTGTGCCT
....((((((((..((((....&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001288824
GeneSymbolGDF9
Binding site1227,1240
Score0.923
Seed0
Au0.588
Energy-16.0
Binding len13
Me-11.693
Phylopstem0.27148887499999996
Phylopflank0.6838363950000004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure