Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCAAGGTTGGAAGCCGCTCTTGGAGGTCGTGAGGCTGCAGC
((((((((((((((.......&.))))))...............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288824
GeneSymbolGDF9
Binding site17,61
Score0.846
Seed1
Au0.441
Energy-18.6
Binding len31
Me-4.906
Phylopstem0.7545322034482755
Phylopflank0.42512766375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure