Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAGCTATAAATAGGCAATTCAGATTGCTGTAGT
(((((((((((((((((((..&)))))))))........))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288824
GeneSymbolGDF9
Binding site1520,1557
Score0.923
Seed1
Au0.676
Energy-17.8
Binding len37
Me-3.938
Phylopstem1.378046788888889
Phylopflank1.4576132399999997
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end6
Position3UTR
2D Structure