Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGGCTGCAGCCAGACTCCAGAGCTTTGCAC
.(((((((((((((...((((&)))).)))))))))...............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288826
GeneSymbolGDF9
Binding site256,290
Score0.897
Seed1
Au0.5
Energy-18.7
Binding len34
Me-4.762
Phylopstem-0.2389664857142857
Phylopflank-0.19955867250000003
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end5
Position5UTR
2D Structure