Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCTTACAGCCCGGCCGTGCT
..(((((((.(((((((((((&)))..))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288834
GeneSymbolC19orf44
Binding site1717,1740
Score1.0
Seed1
Au0.353
Energy-20.3
Binding len23
Me-6.2
Phylopstem2.721475769230769
Phylopflank2.3662752
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure