Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTCCAGACGAAGTGACGTTGAGATCCTCGGCTACTGCATGCTGCGGT
(((((((((((((.((.(((.&.)))..)).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288837
GeneSymbolVRK2
Binding site1479,1531
Score0.846
Seed1
Au0.441
Energy-23.2
Binding len24
Me-4.794
Phylopstem4.962266571428572
Phylopflank3.7579401574999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure