Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGTGGGTACGTATGTCCCTTACTCATCCGGGAAGTATTCATACAGGTTTTGATCAAGCTGCGGGTGTG
..((((((((((((((((...&.))))))......................)))))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001288950
GeneSymbolASTE1
Binding site564,638
Score0.846
Seed1
Au0.559
Energy-23.8
Binding len41
Me-4.957
Phylopstem1.103815477179487
Phylopflank1.4406398528125006
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure