Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAATACAACCAGCAGTTCCTGTCCTGCC
..(((((((((((((((.((.&))..))))))).))))........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288968
GeneSymbolACSF2
Binding site853,882
Score0.923
Seed1
Au0.456
Energy-18.7
Binding len29
Me-4.957
Phylopstem2.2981556666666667
Phylopflank1.9417156249999996
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure