Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCACAGCTGTGCCAGT
..((((((((...(((.(((..&))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001288979
GeneSymbolLIPA
Binding site1542,1559
Score0.923
Seed1
Au0.662
Energy-15.1
Binding len17
Me-12.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure