Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAGCCCCGTGGTTGCC
..((((((((((......(((&)))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288979
GeneSymbolLIPA
Binding site1883,1903
Score0.846
Seed1
Au0.515
Energy-17.9
Binding len20
Me-8.071
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure