Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACTGCGGAGGAAGCTGCGAG
((((((((((((((.......&))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288980
GeneSymbolC18orf54
Binding site49,70
Score0.846
Seed1
Au0.309
Energy-17.7
Binding len21
Me-4.906
Phylopstem0.4834015134999999
Phylopflank0.5883171894102561
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure