Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACACCTACATGAGCCAGGC
.((((((.....((((((....&.))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001288990
GeneSymbolTSNAXIP1
Binding site2234,2255
Score0.923
Seed1
Au0.426
Energy-17.9
Binding len16
Me-14.577
Phylopstem0.08600403333333335
Phylopflank1.1480029975
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure