Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCGACCGGCTGTAC
.((((((..(((((((..(((&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288990
GeneSymbolTSNAXIP1
Binding site188,208
Score0.846
Seed1
Au0.265
Energy-20.0
Binding len20
Me-7.163
Phylopstem0.6140017285714287
Phylopflank0.002944093750000043
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure