Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGAACTAAGGCTGCAGC
((((((((..((((.(..(((&)))..).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001288990
GeneSymbolTSNAXIP1
Binding site627,649
Score0.846
Seed1
Au0.515
Energy-19.6
Binding len22
Me-6.972
Phylopstem2.74702325
Phylopflank2.6875649137499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure