Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTCGCTGTGTAGCCCAGGC
.(((((..((((..((((((((&)))))).))..))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001288996
GeneSymbolLIN54
Binding site3314,3337
Score0.846
Seed0
Au0.5
Energy-18.6
Binding len23
Me-9.797
Phylopstem2.3585905555555557
Phylopflank1.5360717199999998
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure