Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATTGTAAAAACAGGA
.((((...(((((((((((...&)))))))))))....)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001288996
GeneSymbolLIN54
Binding site4671,4691
Score0.846
Seed0
Au0.75
Energy-18.0
Binding len20
Me-9.552
Phylopstem6.2146372727272725
Phylopflank4.519385294999999
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure