Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATTGTAAAAACAGGA
.((((...(((((((((((...&)))))))))))....)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001288997
GeneSymbolLIN54
Binding site4023,4043
Score0.846
Seed0
Au0.75
Energy-18.0
Binding len20
Me-9.552
Phylopstem4.984474181818182
Phylopflank5.0482982637500005
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure